Plot heatmap of specified genes/proteins across multiple omics results

Usage

plot_multi_heatmap(
  omics_list,
  choose_name,
  to_upper = FALSE,
  color = c("RdBu", "RdYlBu", "RdYlGn", "BrBG", "PiYG", "PRGn", "PuOr", "RdGy",
    "Spectral"),
  col_limit = 6,
  width = 7,
  height = 10,
  row_font_size = 5,
  col_font_size = 11,
  ...
)

Arguments

omics_list: A list composed of SummarizedExperiment or DEGdata objects.
choose_name: Character, the vector of specified identifiers.
to_upper: Logical, whether transform all identifiers to upper
color: Character(1), sets the color panel (from RColorBrewer). It can be a palette name in "RdBu", "RdYlBu", "RdYlGn", "BrBG", "PiYG", "PRGn", "PuOr", "RdGy", "Spectral".
col_limit: Integer(1), Sets the outer limits of the color scale.
width: Numeric, the width of heatmap
height: Numeric, the height of heatmap
row_font_size: Numeric, the size of row label.
...: other parameters to Heatmap

Value

A HeatmapList from ComplexHeatmap package